# broadinstitute/gatk SLOC report

> As of 2026-09-17 (commit 0cde69eed303), broadinstitute/gatk contains 323,028 total lines: 204,328 code, 76,074 comments, 42,626 blank, across 1,863 files in 16 languages (top: Java 91.2%). Custom configuration (tests excluded, docs excluded, generated excluded). Counted with tokei via OctoCounts.

broadinstitute/gatk has 204,328 source lines of code out of 323,028 total lines across 1,863 files, counted from the 0cde69eed30339f5978cbb1ac6e5cf3662f9e1f8 ref at commit 0cde69eed303 by the OctoCounts tokei engine on 2026-09-17. The report is cached by commit, tokei version, and analysis options, so recounting the same revision returns exactly these numbers.

OctoCounts produced this report by resolving broadinstitute/gatk to commit 0cde69eed303, downloading the repository source archive, and counting every source file with tokei, the open-source line counter written in Rust. The table below breaks the count down by programming language into files, total lines, code lines, comment lines, and blank lines, so the figures can be compared across languages and projects. Results are cached by commit, tokei version, and analysis options, so counting the same revision again reproduces exactly these numbers.

## Repository size insights

This is a large codebase by counted code lines. Code represents 63.3% of all lines, comments represent 23.6%, and the repository averages 110 code lines per file. Java accounts for 91.2% of counted code.

| Language | Files | Lines | Code | Comments | Blanks |
| --- | ---: | ---: | ---: | ---: | ---: |
| Java | 1,612 | 297,624 | 186,429 | 72,526 | 38,669 |
| Python | 84 | 12,115 | 9,561 | 644 | 1,910 |
| Shell | 73 | 7,048 | 4,812 | 1,223 | 1,013 |
| FreeMarker | 7 | 1,597 | 1,459 | 15 | 123 |
| R | 11 | 892 | 643 | 80 | 169 |
| JSON | 36 | 580 | 537 | 0 | 43 |
| HTML | 5 | 542 | 461 | 1 | 80 |
| CSS | 1 | 160 | 160 | 0 | 0 |
| Dockerfile | 3 | 176 | 128 | 22 | 26 |
| BASH | 1 | 112 | 83 | 7 | 22 |
| YAML | 1 | 39 | 31 | 1 | 7 |
| XML | 1 | 13 | 13 | 0 | 0 |

Top language (Java 91.2%). Generated at 2026-09-17T15:19:19.832841298+00:00. Canonical report: https://octocounts.com/github/broadinstitute/gatk

## Reproduce this report

[Reproduce this exact report and configuration](https://octocounts.com/github/broadinstitute/gatk/commit/0cde69eed30339f5978cbb1ac6e5cf3662f9e1f8?analysis=%7B%22ignoredDirs%22%3A%5B%5D%2C%22ignoredLanguages%22%3A%5B%5D%2C%22profile%22%3A%22default%22%2C%22includeDocs%22%3Afalse%2C%22includeTests%22%3Afalse%2C%22includeGenerated%22%3Afalse%7D).

## Report FAQ

### How many lines of code does broadinstitute/gatk have?

broadinstitute/gatk has 323,028 total lines, including 204,328 code lines, 76,074 comment lines, and 42,626 blank lines.

### How was the broadinstitute/gatk line count measured?

OctoCounts resolved the public GitHub repository to commit 0cde69eed303, downloaded the source archive, counted it with tokei, and cached the report by commit, tokei version, and analysis options.

### What commit was counted for broadinstitute/gatk?

This OctoCounts report was generated from 0cde69eed30339f5978cbb1ac6e5cf3662f9e1f8 at commit 0cde69eed303 on 2026-09-17T15:19:19.832841298+00:00.

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